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SMPD3 sphingomyelin phosphodiesterase 3 [ Cuculus canorus (common cuckoo) ]

Gene ID: 104056811, updated on 12-Mar-2024

Summary

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Gene symbol
SMPD3
Gene description
sphingomyelin phosphodiesterase 3
Locus tag
N303_12353
See related
EnsemblRapid:ENSCCOG00010010358
Gene type
protein coding
RefSeq status
MODEL
Organism
Cuculus canorus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Cuculiformes; Cuculidae; Cuculus
Orthologs
human mouse all
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Genomic context

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See SMPD3 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2023_02 current bCucCan1.pri (GCF_017976375.1) 13 NC_071413.1 (15656154..15761130)
100 previous assembly ASM70932v1 (GCF_000709325.1) Unplaced Scaffold NW_009244467.1 (1695243..1725094)

Chromosome 13 - NC_071413.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC128853454 Neighboring gene leukotriene B4 receptor 1 Neighboring gene phospholipase A2 group XV Neighboring gene 3'-5' RNA helicase YTHDC2-like Neighboring gene cap methyltransferase 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sphingomyelin phosphodiesterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in sphingomyelin metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sphingomyelin phosphodiesterase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_017976375.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bCucCan1.pri

Genomic

  1. NC_071413.1 Reference bCucCan1.pri

    Range
    15656154..15761130
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054079069.1 → XP_053935044.1  sphingomyelin phosphodiesterase 3

    UniProtKB/TrEMBL
    A0A091FY31
    Related
    ENSCCOP00010014947.1, ENSCCOT00010018317.1
Nucleotide Protein
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