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CHPF chondroitin polymerizing factor [ Cuculus canorus (common cuckoo) ]

Gene ID: 104054604, updated on 3-Aug-2024

Summary

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Gene symbol
CHPF
Gene description
chondroitin polymerizing factor
Locus tag
N303_07155
See related
EnsemblRapid:ENSCCOG00010002299
Gene type
protein coding
RefSeq status
MODEL
Organism
Cuculus canorus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Otidimorphae; Cuculiformes; Cuculidae; Cuculus
Orthologs
human mouse all
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Genomic context

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See CHPF in Genome Data Viewer
Location:
chromosome: 6
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_02 current bCucCan1.pri (GCF_017976375.1) 6 NC_071406.1 (17908158..17913803, complement)
100 previous assembly ASM70932v1 (GCF_000709325.1) Unplaced Scaffold NW_009243908.1 (200738..203426, complement)

Chromosome 6 - NC_071406.1Genomic Context describing neighboring genes Neighboring gene rac GTPase-activating protein 1 Neighboring gene acid sensing ion channel subunit family member 4 Neighboring gene acid-sensing ion channel 1-like Neighboring gene transmembrane protein 198 Neighboring gene obscurin like cytoskeletal adaptor 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chondroitin sulfate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi cisterna membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
chondroitin sulfate synthase 2
Names
Chondroitin sulfate synthase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_017976375.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bCucCan1.pri

Genomic

  1. NC_071406.1 Reference bCucCan1.pri

    Range
    17908158..17913803 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054070660.1 → XP_053926635.1  chondroitin sulfate synthase 2

    Related
    ENSCCOP00010003171.1, ENSCCOT00010004013.1
Nucleotide Protein
Heading Accession and Version

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