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TJP2 tight junction protein 2 [ Phalacrocorax carbo (great cormorant) ]

Gene ID: 104050312, updated on 3-Aug-2024

Summary

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Gene symbol
TJP2
Gene description
tight junction protein 2
Locus tag
N336_06370
Gene type
protein coding
RefSeq status
MODEL
Organism
Phalacrocorax carbo
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Suliformes; Phalacrocoracidae; Phalacrocorax
Orthologs
human mouse all
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Genomic context

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See TJP2 in Genome Data Viewer
Location:
chromosome: Z
Exon count:
27
Annotation release Status Assembly Chr Location
RS_2024_04 current bPhaCar2.1 (GCF_963921805.1) Z NC_087548.1 (37910072..37975855, complement)
100 previous assembly ASM70892v1 (GCF_000708925.1) Unplaced Scaffold NW_009169972.1 (5983..33525)

Chromosome Z - NC_087548.1Genomic Context describing neighboring genes Neighboring gene 3-hydroxyacyl-CoA dehydratase 4 Neighboring gene interferon epsilon Neighboring gene uncharacterized LOC135310561 Neighboring gene frataxin Neighboring gene phosphatidylinositol-4-phosphate 5-kinase type 1 beta

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell-cell junction organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in establishment of endothelial intestinal barrier IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of blood-brain barrier permeability IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein localization to cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in bicellular tight junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tight junction protein ZO-2
Names
Tight junction protein ZO-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_963921805.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bPhaCar2.1

Genomic

  1. NC_087548.1 Reference bPhaCar2.1

    Range
    37910072..37975855 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_064438645.1 → XP_064294715.1  tight junction protein ZO-2 isoform X1

  2. XM_064438650.1 → XP_064294720.1  tight junction protein ZO-2 isoform X1

  3. XM_064438647.1 → XP_064294717.1  tight junction protein ZO-2 isoform X1

  4. XM_064438646.1 → XP_064294716.1  tight junction protein ZO-2 isoform X1

  5. XM_064438648.1 → XP_064294718.1  tight junction protein ZO-2 isoform X1

  6. XM_064438651.1 → XP_064294721.1  tight junction protein ZO-2 isoform X2

Nucleotide Protein
Heading Accession and Version

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