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SOAT1 sterol O-acyltransferase 1 [ Phalacrocorax carbo (great cormorant) ]

Gene ID: 104050189, updated on 3-Aug-2024

Summary

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Gene symbol
SOAT1
Gene description
sterol O-acyltransferase 1
Locus tag
N336_01124
Gene type
protein coding
RefSeq status
MODEL
Organism
Phalacrocorax carbo
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Suliformes; Phalacrocoracidae; Phalacrocorax
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 6
Exon count:
21
Annotation release Status Assembly Chr Location
RS_2024_04 current bPhaCar2.1 (GCF_963921805.1) 6 NC_087518.1 (32537294..32570320)
100 previous assembly ASM70892v1 (GCF_000708925.1) Unplaced Scaffold NW_009169507.1 (36946..62559, complement)

Chromosome 6 - NC_087518.1Genomic Context describing neighboring genes Neighboring gene torsin family 3 member A Neighboring gene ABL proto-oncogene 2, non-receptor tyrosine kinase Neighboring gene axonemal dynein light chain domain containing 1 Neighboring gene NPHS2 stomatin family member, podocin

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cholesterol O-acyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cholesterol binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables fatty-acyl-CoA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cholesterol efflux IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cholesterol metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sterol O-acyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_963921805.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bPhaCar2.1

Genomic

  1. NC_087518.1 Reference bPhaCar2.1

    Range
    32537294..32570320
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_064454480.1 → XP_064310550.1  sterol O-acyltransferase 1 isoform X2

    UniProtKB/TrEMBL
    A0A093R0S4

  2. XM_064454479.1 → XP_064310549.1  sterol O-acyltransferase 1 isoform X1

    UniProtKB/TrEMBL
    A0A093R0S4

  3. XM_064454481.1 → XP_064310551.1  sterol O-acyltransferase 1 isoform X1

    UniProtKB/TrEMBL
    A0A093R0S4

  4. XM_064454483.1 → XP_064310553.1  sterol O-acyltransferase 1 isoform X1

    UniProtKB/TrEMBL
    A0A093R0S4

  5. XM_064454476.1 → XP_064310546.1  sterol O-acyltransferase 1 isoform X1

    UniProtKB/TrEMBL
    A0A093R0S4

  6. XM_064454478.1 → XP_064310548.1  sterol O-acyltransferase 1 isoform X1

    UniProtKB/TrEMBL
    A0A093R0S4

  7. XM_064454482.1 → XP_064310552.1  sterol O-acyltransferase 1 isoform X1

    UniProtKB/TrEMBL
    A0A093R0S4

  8. XM_064454484.1 → XP_064310554.1  sterol O-acyltransferase 1 isoform X1

    UniProtKB/TrEMBL
    A0A093R0S4
Nucleotide Protein
Heading Accession and Version

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