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CA4 carbonic anhydrase 4 [ Pelecanus crispus (Dalmatian pelican) ]

Gene ID: 104028491, updated on 3-Aug-2024

Summary

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Gene symbol
CA4
Gene description
carbonic anhydrase 4
Locus tag
N334_13796
Gene type
protein coding
RefSeq status
MODEL
Organism
Pelecanus crispus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Pelecaniformes; Pelecanidae; Pelecanus
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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See CA4 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
100 current ASM68737v1 (GCF_000687375.1) Unplaced Scaffold NW_009058989.1 (13132..19827)

NW_009058989.1Genomic Context describing neighboring genes Neighboring gene ubiquitin specific peptidase 32

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009058989.1 Unplaced Scaffold Reference ASM68737v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables carbonate dehydratase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carbonic anhydrase 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pelecanus crispus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM68737v1

Genomic

  1. NW_009058989.1 Reference ASM68737v1

    Range
    13132..19827
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009479525.1 → XP_009477800.1  carbonic anhydrase 4

    UniProtKB/TrEMBL
    A0A091TD22
    Conserved Domains (1) summary
    cd03117
    Location:33 → 271
    alpha_CA_IV_XV_like; Carbonic anhydrase alpha, CA_IV, CA_XV, like isozymes. Carbonic anhydrases (CAs) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism: a nucleophilic attack of a zinc-bound hydroxide ion on carbon ...
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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