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LOC104028050 UDP-glucose:glycoprotein glucosyltransferase 2-like [ Pelecanus crispus (Dalmatian pelican) ]

Gene ID: 104028050, updated on 3-Aug-2024

Summary

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Gene symbol
LOC104028050
Gene description
UDP-glucose:glycoprotein glucosyltransferase 2-like
Locus tag
N334_02183
Gene type
protein coding
RefSeq status
MODEL
Organism
Pelecanus crispus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Pelecaniformes; Pelecanidae; Pelecanus
Annotation information
Annotation category: partial on reference assembly
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Genomic context

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See LOC104028050 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
20
Annotation release Status Assembly Chr Location
100 current ASM68737v1 (GCF_000687375.1) Unplaced Scaffold NW_009073339.1 (1670..45692)

NW_009073339.1Genomic Context describing neighboring genes Neighboring gene DnaJ heat shock protein family (Hsp40) member C3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009073339.1 Unplaced Scaffold Reference ASM68737v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-glucose:glycoprotein glucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables unfolded protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation via asparagine IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UDP-glucose:glycoprotein glucosyltransferase 2-like
Names
UDP-glucose:glycoprotein glucosyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pelecanus crispus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM68737v1

Genomic

  1. NW_009073339.1 Reference ASM68737v1

    Range
    1670..45692
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009478969.1 → XP_009477244.1  UDP-glucose:glycoprotein glucosyltransferase 2-like

    UniProtKB/TrEMBL
    A0A091TKY2
    Conserved Domains (2) summary
    cd06432
    Location:498 → 745
    GT8_HUGT1_C_like; The C-terminal domain of HUGT1-like is highly homologous to the GT 8 family
    pfam06427
    Location:1 → 459
    UDP-g_GGTase; UDP-glucose:Glycoprotein Glucosyltransferase
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases