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INPP5F inositol polyphosphate-5-phosphatase F [ Pelecanus crispus (Dalmatian pelican) ]

Gene ID: 104027869, updated on 3-Aug-2024

Summary

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Gene symbol
INPP5F
Gene description
inositol polyphosphate-5-phosphatase F
Locus tag
N334_11652
Gene type
protein coding
RefSeq status
MODEL
Organism
Pelecanus crispus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Pelecaniformes; Pelecanidae; Pelecanus
Orthologs
human mouse all
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Genomic context

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See INPP5F in Genome Data Viewer
Location:
chromosome: Un
Exon count:
19
Annotation release Status Assembly Chr Location
100 current ASM68737v1 (GCF_000687375.1) Unplaced Scaffold NW_009072706.1 (19817..49963, complement)

NW_009072706.1Genomic Context describing neighboring genes Neighboring gene minichromosome maintenance complex binding protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009072706.1 Unplaced Scaffold Reference ASM68737v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol-4-phosphate phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phosphatidylinositol dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of endocytic recycling IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in clathrin-coated endocytic vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in early endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphatidylinositide phosphatase SAC2
Names
Phosphatidylinositide phosphatase SAC2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pelecanus crispus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM68737v1

Genomic

  1. NW_009072706.1 Reference ASM68737v1

    Range
    19817..49963 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009478734.1 → XP_009477009.1  phosphatidylinositide phosphatase SAC2

    UniProtKB/TrEMBL
    A0A091SKS5
    Conserved Domains (2) summary
    pfam02383
    Location:1 → 247
    Syja_N; SacI homology domain
    pfam12456
    Location:427 → 529
    hSac2; Inositol phosphatase
Nucleotide Protein
Heading Accession and Version

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