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LOC104021895 N-acetyllactosaminide beta-1,6-N-acetylglucosaminyl-transferase [ Nipponia nippon (crested ibis) ]

Gene ID: 104021895, updated on 3-Aug-2024

Summary

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Gene symbol
LOC104021895
Gene description
N-acetyllactosaminide beta-1,6-N-acetylglucosaminyl-transferase
Gene type
protein coding
RefSeq status
MODEL
Organism
Nipponia nippon
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Pelecaniformes; Threskiornithidae; Nipponia
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Genomic context

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See LOC104021895 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
100 current ASM70822v1 (GCF_000708225.1) Unplaced Scaffold NW_009057286.1 (8449295..8459505, complement)

NW_009057286.1Genomic Context describing neighboring genes Neighboring gene male germ cell associated kinase Neighboring gene uncharacterized LOC104021826 Neighboring gene N-acetyllactosaminide beta-1,6-N-acetylglucosaminyl-transferase Neighboring gene transcription factor AP-2 alpha

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009057286.1 Unplaced Scaffold Reference ASM70822v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in transforming growth factor beta receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
N-acetyllactosaminide beta-1,6-N-acetylglucosaminyl-transferase, isoform A-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nipponia nippon Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM70822v1 Primary Assembly

Genomic

  1. NW_009057286.1 Reference ASM70822v1 Primary Assembly

    Range
    8449295..8459505 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009475515.1 → XP_009473790.1  N-acetyllactosaminide beta-1,6-N-acetylglucosaminyl-transferase, isoform A-like

    Conserved Domains (1) summary
    pfam02485
    Location:130 → 364
    Branch; Core-2/I-Branching enzyme
Nucleotide Protein
Heading Accession and Version

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