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SYNGR1 synaptogyrin 1 [ Nipponia nippon (crested ibis) ]

Gene ID: 104021697, updated on 12-Mar-2024

Summary

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Gene symbol
SYNGR1
Gene description
synaptogyrin 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Nipponia nippon
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Pelecaniformes; Threskiornithidae; Nipponia
Orthologs
human mouse all
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Genomic context

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See SYNGR1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current ASM70822v1 (GCF_000708225.1) Unplaced Scaffold NW_009057284.1 (1934190..1940551)

NW_009057284.1Genomic Context describing neighboring genes Neighboring gene platelet derived growth factor subunit B Neighboring gene ribosomal protein L3 Neighboring gene TGF-beta activated kinase 1 (MAP3K7) binding protein 1 Neighboring gene beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009057284.1 Unplaced Scaffold Reference ASM70822v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in neuromuscular junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in synaptic vesicle membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
synaptogyrin-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nipponia nippon Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM70822v1 Primary Assembly

Genomic

  1. NW_009057284.1 Reference ASM70822v1 Primary Assembly

    Range
    1934190..1940551
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009475294.1 → XP_009473569.1  synaptogyrin-1

    Conserved Domains (1) summary
    pfam01284
    Location:5 → 138
    MARVEL; Membrane-associating domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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