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TAB1 TGF-beta activated kinase 1 (MAP3K7) binding protein 1 [ Nipponia nippon (crested ibis) ]

Gene ID: 104021621, updated on 3-Aug-2024

Summary

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Gene symbol
TAB1
Gene description
TGF-beta activated kinase 1 (MAP3K7) binding protein 1
Locus tag
Y956_01229
Gene type
protein coding
RefSeq status
MODEL
Organism
Nipponia nippon
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Pelecaniformes; Threskiornithidae; Nipponia
Orthologs
human mouse all
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Genomic context

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See TAB1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
100 current ASM70822v1 (GCF_000708225.1) Unplaced Scaffold NW_009057284.1 (1949790..1958664)

NW_009057284.1Genomic Context describing neighboring genes Neighboring gene ribosomal protein L3 Neighboring gene synaptogyrin 1 Neighboring gene beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase Neighboring gene mitochondrial elongation factor 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009057284.1 Unplaced Scaffold Reference ASM70822v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein serine/threonine phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
TGF-beta-activated kinase 1 and MAP3K7-binding protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nipponia nippon Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM70822v1 Primary Assembly

Genomic

  1. NW_009057284.1 Reference ASM70822v1 Primary Assembly

    Range
    1949790..1958664
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009475216.1 → XP_009473491.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 1 isoform X2

    Conserved Domains (1) summary
    cl00120
    Location:69 → 334
    PP2Cc; Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence ...

  2. XM_009475215.1 → XP_009473490.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 1 isoform X1

    Conserved Domains (1) summary
    pfam00481
    Location:69 → 334
    PP2C; Protein phosphatase 2C
Nucleotide Protein
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