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ACSBG2 acyl-CoA synthetase bubblegum family member 2 [ Nipponia nippon (crested ibis) ]

Gene ID: 104018814, updated on 3-Aug-2024

Summary

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Gene symbol
ACSBG2
Gene description
acyl-CoA synthetase bubblegum family member 2
Locus tag
Y956_14269
Gene type
protein coding
RefSeq status
MODEL
Organism
Nipponia nippon
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Pelecaniformes; Threskiornithidae; Nipponia
Orthologs
human mouse all
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Genomic context

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See ACSBG2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
100 current ASM70822v1 (GCF_000708225.1) Unplaced Scaffold NW_009002425.1 (2139412..2151703)

NW_009002425.1Genomic Context describing neighboring genes Neighboring gene la-related protein 6-like Neighboring gene regulatory factor X2 Neighboring gene MLLT1 super elongation complex subunit Neighboring gene alkaline ceramidase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009002425.1 Unplaced Scaffold Reference ASM70822v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables long-chain fatty acid-CoA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
long-chain-fatty-acid--CoA ligase ACSBG2
Names
Long-chain-fatty-acid--CoA ligase ACSBG2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nipponia nippon Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM70822v1 Primary Assembly

Genomic

  1. NW_009002425.1 Reference ASM70822v1 Primary Assembly

    Range
    2139412..2151703
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009471996.1 → XP_009470271.1  long-chain-fatty-acid--CoA ligase ACSBG2

    Conserved Domains (2) summary
    cd05933
    Location:127 → 722
    ACSBG_like; Bubblegum-like very long-chain fatty acid CoA synthetase (VL-FACS)
    COG1022
    Location:88 → 724
    FAA1; Long-chain acyl-CoA synthetase (AMP-forming) [Lipid transport and metabolism]
Nucleotide Protein
Heading Accession and Version

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