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CTBP1 C-terminal binding protein 1 [ Nipponia nippon (crested ibis) ]

Gene ID: 104018549, updated on 3-Aug-2024

Summary

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Gene symbol
CTBP1
Gene description
C-terminal binding protein 1
Locus tag
Y956_10003
Gene type
protein coding
RefSeq status
MODEL
Organism
Nipponia nippon
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Pelecaniformes; Threskiornithidae; Nipponia
Orthologs
human mouse all
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Genomic context

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See CTBP1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
100 current ASM70822v1 (GCF_000708225.1) Unplaced Scaffold NW_009002340.1 (5376541..5573346, complement)

NW_009002340.1Genomic Context describing neighboring genes Neighboring gene transmembrane emp24 domain-containing protein 11-like Neighboring gene spondin 2 Neighboring gene macrophage erythroblast attacher, E3 ubiquitin ligase Neighboring gene UV stimulated scaffold protein A

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009002340.1 Unplaced Scaffold Reference ASM70822v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription corepressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C-terminal-binding protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nipponia nippon Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM70822v1 Primary Assembly

Genomic

  1. NW_009002340.1 Reference ASM70822v1 Primary Assembly

    Range
    5376541..5573346 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009471702.1 → XP_009469977.1  C-terminal-binding protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A091VMA6
    Conserved Domains (2) summary
    COG0111
    Location:61 → 360
    SerA; Phosphoglycerate dehydrogenase or related dehydrogenase [Coenzyme transport and metabolism, General function prediction only]
    cd05299
    Location:34 → 352
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  2. XM_009471701.1 → XP_009469976.1  C-terminal-binding protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A091VMA6
    Conserved Domains (2) summary
    COG0111
    Location:61 → 360
    SerA; Phosphoglycerate dehydrogenase or related dehydrogenase [Coenzyme transport and metabolism, General function prediction only]
    cd05299
    Location:34 → 352
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor
Nucleotide Protein
Heading Accession and Version

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