U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

GALNT2 polypeptide N-acetylgalactosaminyltransferase 2 [ Nipponia nippon (crested ibis) ]

Gene ID: 104017790, updated on 3-Aug-2024

Summary

Go to the top of the page Help
Gene symbol
GALNT2
Gene description
polypeptide N-acetylgalactosaminyltransferase 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Nipponia nippon
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Pelecaniformes; Threskiornithidae; Nipponia
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See GALNT2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
100 current ASM70822v1 (GCF_000708225.1) Unplaced Scaffold NW_008998358.1 (1563232..1610491)

NW_008998358.1Genomic Context describing neighboring genes Neighboring gene TATA-box binding protein associated factor 5 like Neighboring gene URB2 ribosome biogenesis homolog Neighboring gene piggyBac transposable element derived 5 Neighboring gene component of oligomeric golgi complex 2

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_008998358.1 Unplaced Scaffold Reference ASM70822v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
LOW QUALITY PROTEIN: polypeptide N-acetylgalactosaminyltransferase 2

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Nipponia nippon Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM70822v1 Primary Assembly

Genomic

  1. NW_008998358.1 Reference ASM70822v1 Primary Assembly

    Range
    1563232..1610491
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009470863.1 → XP_009469138.1  LOW QUALITY PROTEIN: polypeptide N-acetylgalactosaminyltransferase 2

    Conserved Domains (3) summary
    cd02510
    Location:101 → 396
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    cd00161
    Location:418 → 528
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
    pfam00652
    Location:408 → 526
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.