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MAN2C1 mannosidase alpha class 2C member 1 [ Nipponia nippon (crested ibis) ]

Gene ID: 104016813, updated on 3-Aug-2024

Summary

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Gene symbol
MAN2C1
Gene description
mannosidase alpha class 2C member 1
Locus tag
Y956_05484
Gene type
protein coding
RefSeq status
MODEL
Organism
Nipponia nippon
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Pelecaniformes; Threskiornithidae; Nipponia
Orthologs
human mouse all
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Genomic context

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See MAN2C1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
26
Annotation release Status Assembly Chr Location
100 current ASM70822v1 (GCF_000708225.1) Unplaced Scaffold NW_009001769.1 (2180505..2196506, complement)

NW_009001769.1Genomic Context describing neighboring genes Neighboring gene COMM domain containing 4 Neighboring gene nei like DNA glycosylase 1 Neighboring gene SIN3 transcription regulator family member A Neighboring gene protein tyrosine phosphatase non-receptor type 9

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009001769.1 Unplaced Scaffold Reference ASM70822v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-mannosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables carbohydrate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mannose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in oligosaccharide catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-mannosidase 2C1
Names
Alpha-mannosidase 2C1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nipponia nippon Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM70822v1 Primary Assembly

Genomic

  1. NW_009001769.1 Reference ASM70822v1 Primary Assembly

    Range
    2180505..2196506 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009469750.1 → XP_009468025.1  alpha-mannosidase 2C1

    UniProtKB/TrEMBL
    A0A091VH43
    Conserved Domains (4) summary
    cd10813
    Location:240 → 491
    GH38N_AMII_Man2C1; N-terminal catalytic domain of mammalian cytosolic alpha-mannosidase Man2C1 and similar proteins; glycoside hydrolase family 38 (GH38)
    COG0383
    Location:57 → 1020
    AMS1; Alpha-mannosidase [Carbohydrate transport and metabolism]
    pfam07748
    Location:618 → 1016
    Glyco_hydro_38C; Glycosyl hydrolases family 38 C-terminal domain
    pfam09261
    Location:505 → 584
    Alpha-mann_mid; Alpha mannosidase, middle domain
Nucleotide Protein
Heading Accession and Version

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