U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SDC3 syndecan 3 [ Nipponia nippon (crested ibis) ]

Gene ID: 104015865, updated on 3-Aug-2024

Summary

Go to the top of the page Help
Gene symbol
SDC3
Gene description
syndecan 3
Locus tag
Y956_08650
Gene type
protein coding
RefSeq status
MODEL
Organism
Nipponia nippon
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Pelecaniformes; Threskiornithidae; Nipponia
Also known as
Syndecan-3
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See SDC3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
100 current ASM70822v1 (GCF_000708225.1) Unplaced Scaffold NW_008998291.1 (2109359..2149430)

NW_008998291.1Genomic Context describing neighboring genes Neighboring gene sodium/potassium transporting ATPase interacting 1 Neighboring gene pumilio RNA binding family member 1 Neighboring gene lysosomal protein transmembrane 5 Neighboring gene matrilin 1

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_008998291.1 Unplaced Scaffold Reference ASM70822v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell surface IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
syndecan-3

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Nipponia nippon Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM70822v1 Primary Assembly

Genomic

  1. NW_008998291.1 Reference ASM70822v1 Primary Assembly

    Range
    2109359..2149430
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009468659.1 → XP_009466934.1  syndecan-3

    UniProtKB/TrEMBL
    A0A091UKI2
    Conserved Domains (1) summary
    pfam01034
    Location:328 → 390
    Syndecan; Syndecan domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.