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MDH1 malate dehydrogenase 1 [ Nipponia nippon (crested ibis) ]

Gene ID: 104014929, updated on 3-Aug-2024

Summary

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Gene symbol
MDH1
Gene description
malate dehydrogenase 1
Locus tag
Y956_07296
Gene type
protein coding
RefSeq status
MODEL
Organism
Nipponia nippon
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Pelecaniformes; Threskiornithidae; Nipponia
Orthologs
human mouse all
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Genomic context

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See MDH1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
100 current ASM70822v1 (GCF_000708225.1) Unplaced Scaffold NW_009001173.1 (277965..289759, complement)

NW_009001173.1Genomic Context describing neighboring genes Neighboring gene VPS54 subunit of GARP complex Neighboring gene UDP-glucose pyrophosphorylase 2 Neighboring gene WD repeat containing planar cell polarity effector Neighboring gene orthodenticle homeobox 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009001173.1 Unplaced Scaffold Reference ASM70822v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-malate dehydrogenase (NAD+) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in NADH metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in malate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in oxaloacetate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in tricarboxylic acid cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
malate dehydrogenase, cytoplasmic
Names
Malate dehydrogenase, cytoplasmic

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nipponia nippon Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM70822v1 Primary Assembly

Genomic

  1. NW_009001173.1 Reference ASM70822v1 Primary Assembly

    Range
    277965..289759 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009467611.1 → XP_009465886.1  malate dehydrogenase, cytoplasmic

    Conserved Domains (2) summary
    TIGR01759
    Location:133 → 458
    MalateDH-SF1; malate dehydrogenase
    cd01336
    Location:134 → 458
    MDH_cytoplasmic_cytosolic; Cytoplasmic and cytosolic Malate dehydrogenases
Nucleotide Protein
Heading Accession and Version

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