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B4GAT1 beta-1,4-glucuronyltransferase 1 [ Nipponia nippon (crested ibis) ]

Gene ID: 104013856, updated on 3-Aug-2024

Summary

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Gene symbol
B4GAT1
Gene description
beta-1,4-glucuronyltransferase 1
Locus tag
Y956_03182
Gene type
protein coding
RefSeq status
MODEL
Organism
Nipponia nippon
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Pelecaniformes; Threskiornithidae; Nipponia
Orthologs
human mouse all
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Genomic context

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See B4GAT1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
100 current ASM70822v1 (GCF_000708225.1) Unplaced Scaffold NW_009000900.1 (8930..14684, complement)

NW_009000900.1Genomic Context describing neighboring genes Neighboring gene uncharacterized transmembrane protein DDB_G0289901-like Neighboring gene arabinogalactan protein 1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009000900.1 Unplaced Scaffold Reference ASM70822v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glucuronosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nipponia nippon Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM70822v1 Primary Assembly

Genomic

  1. NW_009000900.1 Reference ASM70822v1 Primary Assembly

    Range
    8930..14684 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009466400.1 → XP_009464675.1  N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase

    Conserved Domains (1) summary
    pfam13896
    Location:714 → 872
    Glyco_transf_49; Glycosyl-transferase for dystroglycan
Nucleotide Protein
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