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OGT O-linked N-acetylglucosamine (GlcNAc) transferase [ Nipponia nippon (crested ibis) ]

Gene ID: 104012908, updated on 3-Aug-2024

Summary

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Gene symbol
OGT
Gene description
O-linked N-acetylglucosamine (GlcNAc) transferase
Locus tag
Y956_03656
Gene type
protein coding
RefSeq status
MODEL
Organism
Nipponia nippon
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Pelecaniformes; Threskiornithidae; Nipponia
Orthologs
human mouse all
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Genomic context

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See OGT in Genome Data Viewer
Location:
chromosome: Un
Exon count:
22
Annotation release Status Assembly Chr Location
100 current ASM70822v1 (GCF_000708225.1) Unplaced Scaffold NW_009000631.1 (11385548..11414864)

NW_009000631.1Genomic Context describing neighboring genes Neighboring gene rho-related GTP-binding protein RhoG-like Neighboring gene TATA-box binding protein associated factor 1 Neighboring gene germ cell nuclear acidic peptidase

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009000631.1 Unplaced Scaffold Reference ASM70822v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nipponia nippon Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM70822v1 Primary Assembly

Genomic

  1. NW_009000631.1 Reference ASM70822v1 Primary Assembly

    Range
    11385548..11414864
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009465339.1 → XP_009463614.1  UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit isoform X1

    See identical proteins and their annotated locations for XP_009463614.1

    UniProtKB/TrEMBL
    A0A091W609
    Conserved Domains (4) summary
    PLN03088
    Location:414 → 588
    PLN03088; SGT1, suppressor of G2 allele of SKP1; Provisional
    TIGR02917
    Location:22 → 465
    PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
    sd00006
    Location:327 → 355
    TPR; TPR repeat [structural motif]
    pfam13844
    Location:556 → 1023
    Glyco_transf_41; Glycosyl transferase family 41

  2. XM_009465340.1 → XP_009463615.1  UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit isoform X2

    See identical proteins and their annotated locations for XP_009463615.1

    UniProtKB/TrEMBL
    A0A091W609
    Conserved Domains (4) summary
    PLN03088
    Location:404 → 578
    PLN03088; SGT1, suppressor of G2 allele of SKP1; Provisional
    TIGR02917
    Location:23 → 455
    PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
    sd00006
    Location:317 → 345
    TPR; TPR repeat [structural motif]
    pfam13844
    Location:546 → 1013
    Glyco_transf_41; Glycosyl transferase family 41
Nucleotide Protein
Heading Accession and Version

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