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LOC104012685 lactosylceramide 4-alpha-galactosyltransferase-like [ Nipponia nippon (crested ibis) ]

Gene ID: 104012685, updated on 3-Aug-2024

Summary

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Gene symbol
LOC104012685
Gene description
lactosylceramide 4-alpha-galactosyltransferase-like
Locus tag
Y956_09153
Gene type
protein coding
RefSeq status
MODEL
Organism
Nipponia nippon
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Pelecaniformes; Threskiornithidae; Nipponia
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Genomic context

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See LOC104012685 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
100 current ASM70822v1 (GCF_000708225.1) Unplaced Scaffold NW_009000518.1 (4044964..4046082)

NW_009000518.1Genomic Context describing neighboring genes Neighboring gene lactosylceramide 4-alpha-galactosyltransferase-like Neighboring gene lactosylceramide 4-alpha-galactosyltransferase-like Neighboring gene poly(U)-specific endoribonuclease-like Neighboring gene NADH-cytochrome b5 reductase 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009000518.1 Unplaced Scaffold Reference ASM70822v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lactosylceramide 4-alpha-galactosyltransferase-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nipponia nippon Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM70822v1 Primary Assembly

Genomic

  1. NW_009000518.1 Reference ASM70822v1 Primary Assembly

    Range
    4044964..4046082
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009465073.1 → XP_009463348.1  lactosylceramide 4-alpha-galactosyltransferase-like

    UniProtKB/TrEMBL
    A0A091V0Y8
    Conserved Domains (2) summary
    pfam04488
    Location:95 → 203
    Gly_transf_sug; Glycosyltransferase sugar-binding region containing DXD motif
    pfam04572
    Location:226 → 348
    Gb3_synth; Alpha 1,4-glycosyltransferase conserved region
Nucleotide Protein
Heading Accession and Version

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