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LOC104011343 torsin-1A-interacting protein 1-like [ Nipponia nippon (crested ibis) ]

Gene ID: 104011343, updated on 3-Aug-2024

Summary

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Gene symbol
LOC104011343
Gene description
torsin-1A-interacting protein 1-like
Locus tag
Y956_06447
Gene type
protein coding
RefSeq status
MODEL
Organism
Nipponia nippon
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Pelecaniformes; Threskiornithidae; Nipponia
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Genomic context

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See LOC104011343 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
100 current ASM70822v1 (GCF_000708225.1) Unplaced Scaffold NW_008999809.1 (3433617..3434467)

NW_008999809.1Genomic Context describing neighboring genes Neighboring gene ADAMTS-like protein 2 Neighboring gene torsin-1A-interacting protein 2-like Neighboring gene centrosomal protein 350 Neighboring gene quiescin sulfhydryl oxidase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008999809.1 Unplaced Scaffold Reference ASM70822v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in membrane organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
torsin-1A-interacting protein 1-like
Names
Torsin-1A-interacting protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nipponia nippon Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM70822v1 Primary Assembly

Genomic

  1. NW_008999809.1 Reference ASM70822v1 Primary Assembly

    Range
    3433617..3434467
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009463579.1 → XP_009461854.1  torsin-1A-interacting protein 1-like

    UniProtKB/TrEMBL
    A0A091UY03
    Conserved Domains (1) summary
    pfam05609
    Location:1 → 211
    LAP1C; Lamina-associated polypeptide 1C (LAP1C)
Nucleotide Protein
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