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PLCD4 phospholipase C delta 4 [ Nipponia nippon (crested ibis) ]

Gene ID: 104010071, updated on 3-Aug-2024

Summary

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Gene symbol
PLCD4
Gene description
phospholipase C delta 4
Gene type
protein coding
RefSeq status
MODEL
Organism
Nipponia nippon
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Pelecaniformes; Threskiornithidae; Nipponia
Orthologs
human mouse all
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Genomic context

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See PLCD4 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
100 current ASM70822v1 (GCF_000708225.1) Unplaced Scaffold NW_008999555.1 (1425086..1431668, complement)

NW_008999555.1Genomic Context describing neighboring genes Neighboring gene mitochondrial chaperone BCS1 Neighboring gene zinc finger protein 142 Neighboring gene CCR4-NOT transcription complex subunit 9 Neighboring gene ubiquitin specific peptidase 37

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008999555.1 Unplaced Scaffold Reference ASM70822v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylinositol phospholipase C activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lipid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nipponia nippon Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM70822v1 Primary Assembly

Genomic

  1. NW_008999555.1 Reference ASM70822v1 Primary Assembly

    Range
    1425086..1431668 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009462143.1 → XP_009460418.1  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-4

    Conserved Domains (9) summary
    cd00275
    Location:605 → 733
    C2_PLC_like; C2 domain present in Phosphoinositide-specific phospholipases C (PLC)
    cd08593
    Location:272 → 573
    PI-PLCc_delta; Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta
    PLN02228
    Location:189 → 736
    PLN02228; Phosphoinositide phospholipase C
    cd13363
    Location:1 → 116
    PH_PLC_delta; Phospholipase C-delta (PLC-delta) pleckstrin homology (PH) domain
    pfam00169
    Location:1 → 107
    PH; PH domain
    pfam09279
    Location:190 → 272
    EF-hand_like; Phosphoinositide-specific phospholipase C, efhand-like
    pfam13202
    Location:122 → 146
    EF-hand_5; EF hand
    pfam13499
    Location:122 → 182
    EF-hand_7; EF-hand domain pair
    pfam14788
    Location:136 → 185
    EF-hand_10; EF hand
Nucleotide Protein
Heading Accession and Version

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