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LOC103996768 polygalacturonase [ Musa acuminata AAA Group (dessert banana) ]

Gene ID: 103996768, updated on 17-Jul-2024

Summary

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Gene symbol
LOC103996768
Gene description
polygalacturonase
Gene type
protein coding
RefSeq status
MODEL
Organism
Musa acuminata AAA Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Zingiberales; Musaceae; Musa
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Genomic context

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See LOC103996768 in Genome Data Viewer
Location:
chromosome: BXJ2-9
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_05 current Cavendish_Baxijiao_AAA (GCF_036884655.1) BXJ2-9 NC_088346.1 (1815351..1817081)

Chromosome BXJ2-9 - NC_088346.1Genomic Context describing neighboring genes Neighboring gene formin-like protein 1 Neighboring gene integrin-linked protein kinase 1-like Neighboring gene disease resistance protein RGA2-like Neighboring gene uncharacterized LOC135622353 Neighboring gene disease resistance protein RPS2-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_088346.1 Chromosome BXJ2-9 Reference Cavendish_Baxijiao_AAA

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polygalacturonase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polygalacturonase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036884655.1-RS_2024_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cavendish_Baxijiao_AAA

Genomic

  1. NC_088346.1 Reference Cavendish_Baxijiao_AAA

    Range
    1815351..1817081
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009417755.3 → XP_009416030.2  polygalacturonase

Nucleotide Protein
Heading Accession and Version

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