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LOC103993712 probable polygalacturonase [ Musa acuminata AAA Group (dessert banana) ]

Gene ID: 103993712, updated on 17-Jul-2024

Summary

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Gene symbol
LOC103993712
Gene description
probable polygalacturonase
Gene type
protein coding
RefSeq status
MODEL
Organism
Musa acuminata AAA Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Zingiberales; Musaceae; Musa
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Genomic context

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See LOC103993712 in Genome Data Viewer
Location:
chromosome: BXJ1-8
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_05 current Cavendish_Baxijiao_AAA (GCF_036884655.1) BXJ1-8 NC_088334.1 (4353196..4359033, complement)

Chromosome BXJ1-8 - NC_088334.1Genomic Context describing neighboring genes Neighboring gene agamous-like MADS-box protein AGL80 Neighboring gene guanosine deaminase-like Neighboring gene INCREASED PETAL GROWTH ANISOTROPY 1-like protein 1 Neighboring gene S-adenosylmethionine synthase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_088334.1 Chromosome BXJ1-8 Reference Cavendish_Baxijiao_AAA

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polygalacturonase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable polygalacturonase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036884655.1-RS_2024_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cavendish_Baxijiao_AAA

Genomic

  1. NC_088334.1 Reference Cavendish_Baxijiao_AAA

    Range
    4353196..4359033 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_065078181.1 → XP_064934253.1  probable polygalacturonase

Nucleotide Protein
Heading Accession and Version

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