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LOC103992082 uncharacterized LOC103992082 [ Musa acuminata AAA Group (dessert banana) ]

Gene ID: 103992082, updated on 17-Jul-2024

Summary

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Gene symbol
LOC103992082
Gene description
uncharacterized LOC103992082
Gene type
protein coding
RefSeq status
MODEL
Organism
Musa acuminata AAA Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Zingiberales; Musaceae; Musa
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Genomic context

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See LOC103992082 in Genome Data Viewer
Location:
chromosome: BXJ2-7
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_05 current Cavendish_Baxijiao_AAA (GCF_036884655.1) BXJ2-7 NC_088344.1 (26674561..26677670)

Chromosome BXJ2-7 - NC_088344.1Genomic Context describing neighboring genes Neighboring gene protein NRT1/ PTR FAMILY 7.2-like Neighboring gene pentatricopeptide repeat-containing protein At1g71210, mitochondrial Neighboring gene WAT1-related protein At3g30340-like Neighboring gene nascent polypeptide-associated complex subunit alpha-like protein Neighboring gene protein CCA1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_088344.1 Chromosome BXJ2-7 Reference Cavendish_Baxijiao_AAA

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables N-acetylglucosaminyldiphosphodolichol N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in dolichol-linked oligosaccharide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of UDP-N-acetylglucosamine transferase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein LOC103992082
Names
UDP-N-acetylglucosamine transferase subunit ALG14 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036884655.1-RS_2024_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cavendish_Baxijiao_AAA

Genomic

  1. NC_088344.1 Reference Cavendish_Baxijiao_AAA

    Range
    26674561..26677670
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_065117698.1 → XP_064973770.1  uncharacterized protein LOC103992082 isoform X3

  2. XM_065117696.1 → XP_064973768.1  uncharacterized protein LOC103992082 isoform X2

  3. XM_009411669.3 → XP_009409944.1  uncharacterized protein LOC103992082 isoform X1

    UniProtKB/TrEMBL
    A0A804JWK7
    Conserved Domains (1) summary
    pfam08660
    Location:45 → 227
    Alg14; Oligosaccharide biosynthesis protein Alg14 like
Nucleotide Protein
Heading Accession and Version

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