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LOC103972111 uncharacterized LOC103972111 [ Musa acuminata AAA Group (dessert banana) ]

Gene ID: 103972111, updated on 17-Jul-2024

Summary

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Gene symbol
LOC103972111
Gene description
uncharacterized LOC103972111
Gene type
protein coding
RefSeq status
MODEL
Organism
Musa acuminata AAA Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Zingiberales; Musaceae; Musa
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Genomic context

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See LOC103972111 in Genome Data Viewer
Location:
chromosome: BXJ2-11
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2024_05 current Cavendish_Baxijiao_AAA (GCF_036884655.1) BXJ2-11 NC_088348.1 (30778493..30786663, complement)

Chromosome BXJ2-11 - NC_088348.1Genomic Context describing neighboring genes Neighboring gene protein STRICTOSIDINE SYNTHASE-LIKE 13-like Neighboring gene rhodanese-like domain-containing protein 8, chloroplastic Neighboring gene uncharacterized LOC103972109 Neighboring gene uncharacterized LOC135627088 Neighboring gene protein SET DOMAIN GROUP 40

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_088348.1 Chromosome BXJ2-11 Reference Cavendish_Baxijiao_AAA

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome profiling of resistant and susceptible Cavendish banana roots following inoculation with Fusarium oxysporum f. sp. cubense tropical race 4. Li CY, et al. BMC Genomics, 2012 Aug 5. PMID 22863187, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in dolichol-linked oligosaccharide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein LOC103972111
Names
UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036884655.1-RS_2024_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cavendish_Baxijiao_AAA

Genomic

  1. NC_088348.1 Reference Cavendish_Baxijiao_AAA

    Range
    30778493..30786663 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_065132415.1 → XP_064988487.1  uncharacterized protein LOC103972111

  2. XM_009386317.3 → XP_009384592.2  uncharacterized protein LOC103972111

  3. XM_009386316.3 → XP_009384591.2  uncharacterized protein LOC103972111

Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases