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LOC103971417 probable polygalacturonase [ Musa acuminata AAA Group (dessert banana) ]

Gene ID: 103971417, updated on 17-Jul-2024

Summary

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Gene symbol
LOC103971417
Gene description
probable polygalacturonase
Gene type
protein coding
RefSeq status
MODEL
Organism
Musa acuminata AAA Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Zingiberales; Musaceae; Musa
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Genomic context

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See LOC103971417 in Genome Data Viewer
Location:
chromosome: BXJ1-11
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_05 current Cavendish_Baxijiao_AAA (GCF_036884655.1) BXJ1-11 NC_088337.1 (23062739..23066476)

Chromosome BXJ1-11 - NC_088337.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein At5g19025-like Neighboring gene uncharacterized LOC103971486 Neighboring gene small nucleolar RNA snoR53Y Neighboring gene agamous-like MADS-box protein AGL65 Neighboring gene GTP-binding protein SAR1A-like Neighboring gene calreticulin-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_088337.1 Chromosome BXJ1-11 Reference Cavendish_Baxijiao_AAA

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polygalacturonase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable polygalacturonase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036884655.1-RS_2024_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cavendish_Baxijiao_AAA

Genomic

  1. NC_088337.1 Reference Cavendish_Baxijiao_AAA

    Range
    23062739..23066476
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_065090063.1 → XP_064946135.1  probable polygalacturonase

  2. XM_009385434.3 → XP_009383709.2  probable polygalacturonase

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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