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MBL mannose-binding lectin [ Pygoscelis adeliae (Adelie penguin) ]

Gene ID: 103924215, updated on 3-Aug-2024

Summary

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Gene symbol
MBL
Gene description
mannose-binding lectin
Gene type
protein coding
RefSeq status
MODEL
Organism
Pygoscelis adeliae
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Sphenisciformes; Spheniscidae; Pygoscelis
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Genomic context

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See MBL in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
100 current ASM69910v1 (GCF_000699105.1) Unplaced Scaffold NW_008825610.1 (1350539..1354862, complement)

NW_008825610.1Genomic Context describing neighboring genes Neighboring gene pulmonary surfactant-associated protein A-like Neighboring gene Pulmonary surfactant-associated protein A Neighboring gene RasGEF domain family member 1A Neighboring gene chondroitin sulfate N-acetylgalactosaminyltransferase 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008825610.1 Unplaced Scaffold Reference ASM69910v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in positive regulation of phagocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in surfactant homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in multivesicular body IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in rough endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: pulmonary surfactant-associated protein D

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pygoscelis adeliae Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69910v1 Primary Assembly

Genomic

  1. NW_008825610.1 Reference ASM69910v1 Primary Assembly

    Range
    1350539..1354862 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009332702.1 → XP_009330977.1  LOW QUALITY PROTEIN: pulmonary surfactant-associated protein D

    Conserved Domains (3) summary
    pfam01391
    Location:47 → 100
    Collagen; Collagen triple helix repeat (20 copies)
    pfam09006
    Location:105 → 143
    Surfac_D-trimer; Lung surfactant protein D coiled-coil trimerization
    cl02432
    Location:142 → 254
    CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain
Nucleotide Protein
Heading Accession and Version

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