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SULF2 sulfatase 2 [ Pygoscelis adeliae (Adelie penguin) ]

Gene ID: 103919258, updated on 3-Aug-2024

Summary

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Gene symbol
SULF2
Gene description
sulfatase 2
Locus tag
AS28_06937
Gene type
protein coding
RefSeq status
MODEL
Organism
Pygoscelis adeliae
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Sphenisciformes; Spheniscidae; Pygoscelis
Orthologs
human mouse all
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Genomic context

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See SULF2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
20
Annotation release Status Assembly Chr Location
100 current ASM69910v1 (GCF_000699105.1) Unplaced Scaffold NW_008825076.1 (1105364..1169462, complement)

NW_008825076.1Genomic Context describing neighboring genes Neighboring gene translocating chain-associated membrane protein 1-like Neighboring gene nuclear receptor coactivator 3 Neighboring gene phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1 Neighboring gene ARF guanine nucleotide exchange factor 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008825076.1 Unplaced Scaffold Reference ASM69910v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables N-acetylglucosamine-6-sulfatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glycosaminoglycan binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cell surface IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
extracellular sulfatase Sulf-2
Names
Extracellular sulfatase Sulf-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pygoscelis adeliae Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69910v1 Primary Assembly

Genomic

  1. NW_008825076.1 Reference ASM69910v1 Primary Assembly

    Range
    1105364..1169462 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009326733.1 → XP_009325008.1  extracellular sulfatase Sulf-2 isoform X2

    Conserved Domains (4) summary
    COG3119
    Location:43 → 387
    AslA; Arylsulfatase A or related enzyme [Inorganic ion transport and metabolism]
    pfam12548
    Location:539 → 667
    DUF3740; Sulfatase protein
    cd16147
    Location:43 → 385
    G6S; glucosamine (N-acetyl)-6-sulfatase(G6S, GNS) AND sulfatase 1(SULF1)
    cl23718
    Location:755 → 804
    ALP_like; alkaline phosphatases and sulfatases

  2. XM_009326732.1 → XP_009325007.1  extracellular sulfatase Sulf-2 isoform X1

    See identical proteins and their annotated locations for XP_009325007.1

    UniProtKB/TrEMBL
    A0A093P9Q8
    Conserved Domains (4) summary
    COG3119
    Location:43 → 387
    AslA; Arylsulfatase A or related enzyme [Inorganic ion transport and metabolism]
    pfam12548
    Location:539 → 667
    DUF3740; Sulfatase protein
    cd16147
    Location:43 → 385
    G6S; glucosamine (N-acetyl)-6-sulfatase(G6S, GNS) AND sulfatase 1(SULF1)
    cl23718
    Location:755 → 804
    ALP_like; alkaline phosphatases and sulfatases
Nucleotide Protein
Heading Accession and Version

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