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ACSL5 acyl-CoA synthetase long chain family member 5 [ Pygoscelis adeliae (Adelie penguin) ]

Gene ID: 103918573, updated on 3-Aug-2024

Summary

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Gene symbol
ACSL5
Gene description
acyl-CoA synthetase long chain family member 5
Locus tag
AS28_09777
Gene type
protein coding
RefSeq status
MODEL
Organism
Pygoscelis adeliae
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Sphenisciformes; Spheniscidae; Pygoscelis
Orthologs
human mouse all
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Genomic context

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See ACSL5 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
20
Annotation release Status Assembly Chr Location
100 current ASM69910v1 (GCF_000699105.1) Unplaced Scaffold NW_008824986.1 (17046070..17057725, complement)

NW_008824986.1Genomic Context describing neighboring genes Neighboring gene vesicle transport through interaction with t-SNAREs 1A Neighboring gene zinc finger DHHC-type palmitoyltransferase 6 Neighboring gene tectorin beta Neighboring gene glycerol-3-phosphate acyltransferase, mitochondrial

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008824986.1 Unplaced Scaffold Reference ASM69910v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables arachidonate-CoA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in long-chain fatty acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
long-chain-fatty-acid--CoA ligase 5
Names
Long-chain-fatty-acid--CoA ligase 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pygoscelis adeliae Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69910v1 Primary Assembly

Genomic

  1. NW_008824986.1 Reference ASM69910v1 Primary Assembly

    Range
    17046070..17057725 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009325948.1 → XP_009324223.1  long-chain-fatty-acid--CoA ligase 5 isoform X1

    See identical proteins and their annotated locations for XP_009324223.1

    UniProtKB/TrEMBL
    A0A093NWD5
    Conserved Domains (2) summary
    PLN02736
    Location:57 → 679
    PLN02736; long-chain acyl-CoA synthetase
    cd05927
    Location:101 → 678
    LC-FACS_euk; Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS)

  2. XM_009325949.1 → XP_009324224.1  long-chain-fatty-acid--CoA ligase 5 isoform X2

    Conserved Domains (2) summary
    PLN02736
    Location:57 → 679
    PLN02736; long-chain acyl-CoA synthetase
    cd05927
    Location:101 → 678
    LC-FACS_euk; Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS)
Nucleotide Protein
Heading Accession and Version

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