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CH25H cholesterol 25-hydroxylase [ Pygoscelis adeliae (Adelie penguin) ]

Gene ID: 103913652, updated on 3-Aug-2024

Summary

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Gene symbol
CH25H
Gene description
cholesterol 25-hydroxylase
Locus tag
AS28_04462
Gene type
protein coding
RefSeq status
MODEL
Organism
Pygoscelis adeliae
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Sphenisciformes; Spheniscidae; Pygoscelis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
100 current ASM69910v1 (GCF_000699105.1) Unplaced Scaffold NW_008823922.1 (798634..800019)

NW_008823922.1Genomic Context describing neighboring genes Neighboring gene interferon-induced protein with tetratricopeptide repeats 5-like Neighboring gene lipase A, lysosomal acid type Neighboring gene Fas cell surface death receptor Neighboring gene actin alpha 2, smooth muscle

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008823922.1 Unplaced Scaffold Reference ASM69910v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables C-4 methylsterol oxidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables steroid hydroxylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cholesterol metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sterol biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cholesterol 25-hydroxylase
Names
Cholesterol 25-hydroxylase-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pygoscelis adeliae Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69910v1 Primary Assembly

Genomic

  1. NW_008823922.1 Reference ASM69910v1 Primary Assembly

    Range
    798634..800019
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009320178.1 → XP_009318453.1  cholesterol 25-hydroxylase

    UniProtKB/TrEMBL
    A0A093NG39
    Conserved Domains (2) summary
    COG3000
    Location:106 → 268
    ERG3; Sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily [Lipid transport and metabolism]
    pfam04116
    Location:134 → 267
    FA_hydroxylase; Fatty acid hydroxylase superfamily
Nucleotide Protein
Heading Accession and Version

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