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HKDC1 hexokinase domain containing 1 [ Aptenodytes forsteri (emperor penguin) ]

Gene ID: 103908207, updated on 3-Aug-2024

Summary

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Gene symbol
HKDC1
Gene description
hexokinase domain containing 1
Locus tag
AS27_09462
Gene type
protein coding
RefSeq status
MODEL
Organism
Aptenodytes forsteri
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Sphenisciformes; Spheniscidae; Aptenodytes
Orthologs
human mouse all
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Genomic context

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See HKDC1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
18
Annotation release Status Assembly Chr Location
101 current ASM69914v1 (GCF_000699145.1) Unplaced Scaffold NW_008794452.1 (4186661..4207204)

NW_008794452.1Genomic Context describing neighboring genes Neighboring gene VPS26, retromer complex component A Neighboring gene Suv3 like RNA helicase Neighboring gene hexokinase-1 Neighboring gene tachykinin receptor 2 Neighboring gene tetraspanin 15

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008794452.1 Unplaced Scaffold Reference ASM69914v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables D-glucose binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables fructokinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glucokinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables mannokinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glucose 6-phosphate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycolytic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular glucose homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
putative hexokinase HKDC1
Names
Putative hexokinase HKDC1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Aptenodytes forsteri Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69914v1

Genomic

  1. NW_008794452.1 Reference ASM69914v1

    Range
    4186661..4207204
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009290542.2 → XP_009288817.1  putative hexokinase HKDC1 isoform X1

    UniProtKB/TrEMBL
    A0A087QMT5
    Conserved Domains (3) summary
    PTZ00107
    Location:462 → 908
    PTZ00107; hexokinase; Provisional
    pfam00349
    Location:469 → 667
    Hexokinase_1; Hexokinase
    pfam03727
    Location:673 → 907
    Hexokinase_2; Hexokinase

  2. XM_019474919.1 → XP_019330464.1  putative hexokinase HKDC1 isoform X2

    UniProtKB/TrEMBL
    A0A087QMT5
Nucleotide Protein
Heading Accession and Version

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