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GLB1 galactosidase beta 1 [ Aptenodytes forsteri (emperor penguin) ]

Gene ID: 103908126, updated on 3-Aug-2024

Summary

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Gene symbol
GLB1
Gene description
galactosidase beta 1
Locus tag
AS27_10422
Gene type
protein coding
RefSeq status
MODEL
Organism
Aptenodytes forsteri
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Sphenisciformes; Spheniscidae; Aptenodytes
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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See GLB1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
101 current ASM69914v1 (GCF_000699145.1) Unplaced Scaffold NW_008794010.1 (8602..44022)

NW_008794010.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein with metallophosphoesterase domain Neighboring gene C-C chemokine receptor type 4 Neighboring gene C-X3-C motif chemokine receptor 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008794010.1 Unplaced Scaffold Reference ASM69914v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-galactosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in vacuole IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-galactosidase
Names
Beta-galactosidase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Aptenodytes forsteri Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69914v1

Genomic

  1. NW_008794010.1 Reference ASM69914v1

    Range
    8602..44022
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009290450.2 → XP_009288725.1  beta-galactosidase

    UniProtKB/TrEMBL
    A0A087QH25
    Conserved Domains (2) summary
    pfam01301
    Location:19 → 333
    Glyco_hydro_35; Glycosyl hydrolases family 35
    pfam13364
    Location:524 → 592
    BetaGal_dom4_5; Beta-galactosidase jelly roll domain
Nucleotide Protein
Heading Accession and Version

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