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ST3GAL6 ST3 beta-galactoside alpha-2,3-sialyltransferase 6 [ Aptenodytes forsteri (emperor penguin) ]

Gene ID: 103907499, updated on 3-Aug-2024

Summary

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Gene symbol
ST3GAL6
Gene description
ST3 beta-galactoside alpha-2,3-sialyltransferase 6
Locus tag
AS27_13059
Gene type
protein coding
RefSeq status
MODEL
Organism
Aptenodytes forsteri
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Sphenisciformes; Spheniscidae; Aptenodytes
Orthologs
human mouse all
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Genomic context

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See ST3GAL6 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
101 current ASM69914v1 (GCF_000699145.1) Unplaced Scaffold NW_008794443.1 (6010075..6049193)

NW_008794443.1Genomic Context describing neighboring genes Neighboring gene transfer RNA aspartic acid (anticodon GUC) Neighboring gene coproporphyrinogen oxidase Neighboring gene collagen type VIII alpha 1 chain Neighboring gene discoidin, CUB and LCCL domain containing 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008794443.1 Unplaced Scaffold Reference ASM69914v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-galactoside alpha-2,3-sialyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
type 2 lactosamine alpha-2,3-sialyltransferase
Names
Type 2 lactosamine alpha-2,3-sialyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Aptenodytes forsteri Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69914v1

Genomic

  1. NW_008794443.1 Reference ASM69914v1

    Range
    6010075..6049193
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009289697.1 → XP_009287972.1  type 2 lactosamine alpha-2,3-sialyltransferase isoform X2

    See identical proteins and their annotated locations for XP_009287972.1

    UniProtKB/TrEMBL
    A0A087QLA6
    Conserved Domains (1) summary
    pfam00777
    Location:134 → 352
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  2. XM_009289698.2 → XP_009287973.1  type 2 lactosamine alpha-2,3-sialyltransferase isoform X2

    See identical proteins and their annotated locations for XP_009287973.1

    UniProtKB/TrEMBL
    A0A087QLA6
    Conserved Domains (1) summary
    pfam00777
    Location:134 → 352
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  3. XM_009289700.2 → XP_009287975.1  type 2 lactosamine alpha-2,3-sialyltransferase isoform X2

    See identical proteins and their annotated locations for XP_009287975.1

    UniProtKB/TrEMBL
    A0A087QLA6
    Conserved Domains (1) summary
    pfam00777
    Location:134 → 352
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  4. XM_009289695.1 → XP_009287970.1  type 2 lactosamine alpha-2,3-sialyltransferase isoform X1

    Conserved Domains (1) summary
    pfam00777
    Location:151 → 365
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)
Nucleotide Protein
Heading Accession and Version

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