U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

IDH1 isocitrate dehydrogenase (NADP(+)) 1 [ Aptenodytes forsteri (emperor penguin) ]

Gene ID: 103907353, updated on 3-Aug-2024

Summary

Go to the top of the page Help
Gene symbol
IDH1
Gene description
isocitrate dehydrogenase (NADP(+)) 1
Locus tag
AS27_10584
Gene type
protein coding
RefSeq status
MODEL
Organism
Aptenodytes forsteri
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Sphenisciformes; Spheniscidae; Aptenodytes
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See IDH1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
101 current ASM69914v1 (GCF_000699145.1) Unplaced Scaffold NW_008794003.1 (1277147..1288179, complement)

NW_008794003.1Genomic Context describing neighboring genes Neighboring gene chromosome unknown C2orf80 homolog Neighboring gene uncharacterized LOC103907363 Neighboring gene shugoshin 2 Neighboring gene phosphoinositide kinase, FYVE-type zinc finger containing Neighboring gene DnaJ heat shock protein family (Hsp40) member C10

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_008794003.1 Unplaced Scaffold Reference ASM69914v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables isocitrate dehydrogenase (NADP+) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables magnesium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in isocitrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in peroxisome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
isocitrate dehydrogenase [NADP] cytoplasmic
Names
Isocitrate dehydrogenase [NADP] cytoplasmic
isocitrate dehydrogenase (NADP(+)) 1, cytosolic

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Aptenodytes forsteri Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69914v1

Genomic

  1. NW_008794003.1 Reference ASM69914v1

    Range
    1277147..1288179 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009289514.1 → XP_009287789.1  isocitrate dehydrogenase [NADP] cytoplasmic

    See identical proteins and their annotated locations for XP_009287789.1

    UniProtKB/TrEMBL
    A0A087QGY1
    Conserved Domains (1) summary
    PTZ00435
    Location:1 → 412
    PTZ00435; isocitrate dehydrogenase; Provisional
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.