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DSEL dermatan sulfate epimerase like [ Aptenodytes forsteri (emperor penguin) ]

Gene ID: 103906607, updated on 3-Aug-2024

Summary

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Gene symbol
DSEL
Gene description
dermatan sulfate epimerase like
Locus tag
AS27_00244
Gene type
protein coding
RefSeq status
MODEL
Organism
Aptenodytes forsteri
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Sphenisciformes; Spheniscidae; Aptenodytes
Orthologs
human mouse all
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Genomic context

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See DSEL in Genome Data Viewer
Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
101 current ASM69914v1 (GCF_000699145.1) Unplaced Scaffold NW_008796216.1 (177657..181307)

NW_008796216.1Genomic Context describing neighboring genes Neighboring gene tubulointerstitial nephritis antigen Neighboring gene muscular LMNA interacting protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008796216.1 Unplaced Scaffold Reference ASM69914v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chondroitin-glucuronate 5-epimerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chondroitin sulfate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in dermatan sulfate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dermatan-sulfate epimerase-like protein
Names
Dermatan-sulfate epimerase-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Aptenodytes forsteri Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69914v1

Genomic

  1. NW_008796216.1 Reference ASM69914v1

    Range
    177657..181307
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009288544.1 → XP_009286819.1  dermatan-sulfate epimerase-like protein

    UniProtKB/TrEMBL
    A0A087RJU9
    Conserved Domains (1) summary
    cl21551
    Location:1031 → 1210
    Sulfotransfer_1; Sulfotransferase domain
Nucleotide Protein
Heading Accession and Version

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