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PIGF phosphatidylinositol glycan anchor biosynthesis class F [ Aptenodytes forsteri (emperor penguin) ]

Gene ID: 103904806, updated on 3-Aug-2024

Summary

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Gene symbol
PIGF
Gene description
phosphatidylinositol glycan anchor biosynthesis class F
Locus tag
AS27_12739
Gene type
protein coding
RefSeq status
MODEL
Organism
Aptenodytes forsteri
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Sphenisciformes; Spheniscidae; Aptenodytes
Orthologs
human mouse all
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Genomic context

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See PIGF in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
101 current ASM69914v1 (GCF_000699145.1) Unplaced Scaffold NW_008796062.1 (407853..429619, complement)

NW_008796062.1Genomic Context describing neighboring genes Neighboring gene protein kinase C epsilon Neighboring gene endothelial PAS domain protein 1 Neighboring gene ras homolog family member Q Neighboring gene CXXC repeat containing interactor of PDZ3 domain Neighboring gene suppressor of cytokine signaling 5

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008796062.1 Unplaced Scaffold Reference ASM69914v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphatidylinositol-glycan biosynthesis class F protein
Names
Phosphatidylinositol-glycan biosynthesis class F protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Aptenodytes forsteri Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69914v1

Genomic

  1. NW_008796062.1 Reference ASM69914v1

    Range
    407853..429619 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009286321.2 → XP_009284596.1  phosphatidylinositol-glycan biosynthesis class F protein isoform X1

    See identical proteins and their annotated locations for XP_009284596.1

    UniProtKB/TrEMBL
    A0A087RFP1
    Conserved Domains (1) summary
    pfam06699
    Location:21 → 204
    PIG-F; GPI biosynthesis protein family Pig-F

  2. XM_009286322.2 → XP_009284597.1  phosphatidylinositol-glycan biosynthesis class F protein isoform X2

    Conserved Domains (1) summary
    pfam06699
    Location:21 → 183
    PIG-F; GPI biosynthesis protein family Pig-F
Nucleotide Protein
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