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CHST9 carbohydrate sulfotransferase 9 [ Aptenodytes forsteri (emperor penguin) ]

Gene ID: 103904218, updated on 3-Aug-2024

Summary

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Gene symbol
CHST9
Gene description
carbohydrate sulfotransferase 9
Locus tag
AS27_05867
Gene type
protein coding
RefSeq status
MODEL
Organism
Aptenodytes forsteri
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Sphenisciformes; Spheniscidae; Aptenodytes
Orthologs
human mouse all
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Genomic context

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See CHST9 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
101 current ASM69914v1 (GCF_000699145.1) Unplaced Scaffold NW_008796043.1 (4574528..4672135)

NW_008796043.1Genomic Context describing neighboring genes Neighboring gene desmocollin 1 Neighboring gene cadherin 2 Neighboring gene aquaporin 4 Neighboring gene potassium channel tetramerization domain containing 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008796043.1 Unplaced Scaffold Reference ASM69914v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carbohydrate sulfotransferase 9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Aptenodytes forsteri Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69914v1

Genomic

  1. NW_008796043.1 Reference ASM69914v1

    Range
    4574528..4672135
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009285629.2 → XP_009283904.1  carbohydrate sulfotransferase 9 isoform X1

    Conserved Domains (1) summary
    pfam03567
    Location:177 → 406
    Sulfotransfer_2; Sulfotransferase family

  2. XM_009285631.2 → XP_009283906.1  carbohydrate sulfotransferase 9 isoform X2

    UniProtKB/TrEMBL
    A0A087RED2
    Conserved Domains (1) summary
    pfam03567
    Location:104 → 333
    Sulfotransfer_2; Sulfotransferase family
Nucleotide Protein
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