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FUCA2 alpha-L-fucosidase 2 [ Aptenodytes forsteri (emperor penguin) ]

Gene ID: 103900794, updated on 3-Aug-2024

Summary

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Gene symbol
FUCA2
Gene description
alpha-L-fucosidase 2
Locus tag
AS27_14792
Gene type
protein coding
RefSeq status
MODEL
Organism
Aptenodytes forsteri
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Sphenisciformes; Spheniscidae; Aptenodytes
Orthologs
human mouse all
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Genomic context

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See FUCA2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
101 current ASM69914v1 (GCF_000699145.1) Unplaced Scaffold NW_008795490.1 (6476386..6590475)

NW_008795490.1Genomic Context describing neighboring genes Neighboring gene LTV1 ribosome biogenesis factor Neighboring gene phosphatase and actin regulator 2 Neighboring gene peroxisomal biogenesis factor 3 Neighboring gene uncharacterized LOC103900714 Neighboring gene adenosine deaminase tRNA specific 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008795490.1 Unplaced Scaffold Reference ASM69914v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-L-fucosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fucose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycoside catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in lysosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
plasma alpha-L-fucosidase
Names
Plasma alpha-L-fucosidase
fucosidase, alpha-L- 2, plasma

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Aptenodytes forsteri Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69914v1

Genomic

  1. NW_008795490.1 Reference ASM69914v1

    Range
    6476386..6590475
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009281566.2 → XP_009279841.1  plasma alpha-L-fucosidase

    Conserved Domains (4) summary
    smart00812
    Location:120 → 461
    Alpha_L_fucos; Alpha-L-fucosidase
    COG3669
    Location:124 → 448
    AfuC; Alpha-L-fucosidase [Carbohydrate transport and metabolism]
    cl14805
    Location:25 → 141
    Csx14_I-U; CRISPR/Cas system-associated protein Csx14
    pfam16757
    Location:424 → 512
    Fucosidase_C; Alpha-L-fucosidase C-terminal domain
Nucleotide Protein
Heading Accession and Version

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