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B3GALNT1 beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group) [ Aptenodytes forsteri (emperor penguin) ]

Gene ID: 103898640, updated on 3-Aug-2024

Summary

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Gene symbol
B3GALNT1
Gene description
beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)
Gene type
protein coding
RefSeq status
MODEL
Organism
Aptenodytes forsteri
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Sphenisciformes; Spheniscidae; Aptenodytes
Orthologs
human mouse all
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Genomic context

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See B3GALNT1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
101 current ASM69914v1 (GCF_000699145.1) Unplaced Scaffold NW_008794154.1 (1300419..1302356, complement)

NW_008794154.1Genomic Context describing neighboring genes Neighboring gene serine palmitoyltransferase small subunit B-like Neighboring gene protein phosphatase, Mg2+/Mn2+ dependent 1L Neighboring gene ARF like GTPase 14 Neighboring gene karyopherin subunit alpha 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008794154.1 Unplaced Scaffold Reference ASM69914v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Aptenodytes forsteri Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69914v1

Genomic

  1. NW_008794154.1 Reference ASM69914v1

    Range
    1300419..1302356 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009278943.2 → XP_009277218.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1

    Conserved Domains (1) summary
    cl21608
    Location:80 → 273
    Galactosyl_T; Galactosyltransferase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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