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CH25H cholesterol 25-hydroxylase [ Aptenodytes forsteri (emperor penguin) ]

Gene ID: 103897652, updated on 3-Aug-2024

Summary

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Gene symbol
CH25H
Gene description
cholesterol 25-hydroxylase
Locus tag
AS27_02603
Gene type
protein coding
RefSeq status
MODEL
Organism
Aptenodytes forsteri
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Sphenisciformes; Spheniscidae; Aptenodytes
Orthologs
human mouse all
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Genomic context

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See CH25H in Genome Data Viewer
Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
101 current ASM69914v1 (GCF_000699145.1) Unplaced Scaffold NW_008795129.1 (7335749..7337142, complement)

NW_008795129.1Genomic Context describing neighboring genes Neighboring gene actin alpha 2, smooth muscle Neighboring gene Fas cell surface death receptor Neighboring gene lipase A, lysosomal acid type Neighboring gene interferon-induced protein with tetratricopeptide repeats 5

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008795129.1 Unplaced Scaffold Reference ASM69914v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables C-4 methylsterol oxidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables steroid hydroxylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cholesterol metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sterol biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cholesterol 25-hydroxylase
Names
Cholesterol 25-hydroxylase-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Aptenodytes forsteri Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69914v1

Genomic

  1. NW_008795129.1 Reference ASM69914v1

    Range
    7335749..7337142 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009277751.2 → XP_009276026.1  cholesterol 25-hydroxylase

    UniProtKB/TrEMBL
    A0A087QZ19
    Conserved Domains (2) summary
    COG3000
    Location:106 → 268
    ERG3; Sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily [Lipid transport and metabolism]
    pfam04116
    Location:134 → 267
    FA_hydroxylase; Fatty acid hydroxylase superfamily
Nucleotide Protein
Heading Accession and Version

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