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PIGV phosphatidylinositol glycan anchor biosynthesis class V [ Aptenodytes forsteri (emperor penguin) ]

Gene ID: 103896361, updated on 3-Aug-2024

Summary

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Gene symbol
PIGV
Gene description
phosphatidylinositol glycan anchor biosynthesis class V
Locus tag
AS27_08880
Gene type
protein coding
RefSeq status
MODEL
Organism
Aptenodytes forsteri
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Sphenisciformes; Spheniscidae; Aptenodytes
Orthologs
human mouse all
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Genomic context

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See PIGV in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
101 current ASM69914v1 (GCF_000699145.1) Unplaced Scaffold NW_008795030.1 (1006895..1013806, complement)

NW_008795030.1Genomic Context describing neighboring genes Neighboring gene zinc finger DHHC-type palmitoyltransferase 18 Neighboring gene stratifin Neighboring gene AT-rich interaction domain 1A Neighboring gene ribosomal protein S6 kinase A1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008795030.1 Unplaced Scaffold Reference ASM69914v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,6-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glycolipid mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of mannosyltransferase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GPI mannosyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Aptenodytes forsteri Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69914v1

Genomic

  1. NW_008795030.1 Reference ASM69914v1

    Range
    1006895..1013806 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009276204.2 → XP_009274479.1  GPI mannosyltransferase 2 isoform X1

    See identical proteins and their annotated locations for XP_009274479.1

    UniProtKB/TrEMBL
    A0A087QW68
    Conserved Domains (1) summary
    cl21590
    Location:12 → 517
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

  2. XM_009276205.1 → XP_009274480.1  GPI mannosyltransferase 2 isoform X1

    See identical proteins and their annotated locations for XP_009274480.1

    UniProtKB/TrEMBL
    A0A087QW68
    Conserved Domains (1) summary
    cl21590
    Location:12 → 517
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

  3. XM_009276207.2 → XP_009274482.1  GPI mannosyltransferase 2 isoform X2

    UniProtKB/TrEMBL
    A0A087QW68
    Conserved Domains (1) summary
    cl21590
    Location:12 → 479
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase
Nucleotide Protein
Heading Accession and Version

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