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POMK protein O-mannose kinase [ Aptenodytes forsteri (emperor penguin) ]

Gene ID: 103894248, updated on 3-Aug-2024

Summary

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Gene symbol
POMK
Gene description
protein O-mannose kinase
Locus tag
AS27_15628
Gene type
protein coding
RefSeq status
MODEL
Organism
Aptenodytes forsteri
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Sphenisciformes; Spheniscidae; Aptenodytes
Orthologs
human mouse all
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Genomic context

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See POMK in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
101 current ASM69914v1 (GCF_000699145.1) Unplaced Scaffold NW_008794665.1 (9783961..9788225, complement)

NW_008794665.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC103894246 Neighboring gene small integral membrane protein 19 Neighboring gene heparan-alpha-glucosaminide N-acetyltransferase Neighboring gene integrator complex subunit 10 Neighboring gene chondroitin sulfate N-acetylgalactosaminyltransferase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008794665.1 Unplaced Scaffold Reference ASM69914v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables carbohydrate kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein O-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein O-mannose kinase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Aptenodytes forsteri Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69914v1

Genomic

  1. NW_008794665.1 Reference ASM69914v1

    Range
    9783961..9788225 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009273591.2 → XP_009271866.1  protein O-mannose kinase

    See identical proteins and their annotated locations for XP_009271866.1

    UniProtKB/TrEMBL
    A0A087QR61
    Conserved Domains (2) summary
    smart00220
    Location:84 → 330
    S_TKc; Serine/Threonine protein kinases, catalytic domain
    cl21453
    Location:89 → 331
    PKc_like; Protein Kinases, catalytic domain
Nucleotide Protein
Heading Accession and Version

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