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HPGDS hematopoietic prostaglandin D synthase [ Aptenodytes forsteri (emperor penguin) ]

Gene ID: 103894200, updated on 3-Aug-2024

Summary

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Gene symbol
HPGDS
Gene description
hematopoietic prostaglandin D synthase
Locus tag
AS27_15556
Gene type
protein coding
RefSeq status
MODEL
Organism
Aptenodytes forsteri
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Sphenisciformes; Spheniscidae; Aptenodytes
Orthologs
human mouse all
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Genomic context

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See HPGDS in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
101 current ASM69914v1 (GCF_000699145.1) Unplaced Scaffold NW_008794665.1 (2565791..2584272, complement)

NW_008794665.1Genomic Context describing neighboring genes Neighboring gene glutamate ionotropic receptor delta type subunit 2 Neighboring gene SNF2 related chromatin remodeling ATPase with DExD box 1 Neighboring gene melanopsin Neighboring gene PDZ and LIM domain 5

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008794665.1 Unplaced Scaffold Reference ASM69914v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glutathione transferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glutathione metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hematopoietic prostaglandin D synthase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Aptenodytes forsteri Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69914v1

Genomic

  1. NW_008794665.1 Reference ASM69914v1

    Range
    2565791..2584272 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009273538.2 → XP_009271813.1  hematopoietic prostaglandin D synthase

    See identical proteins and their annotated locations for XP_009271813.1

    UniProtKB/TrEMBL
    A0A087QQZ6
    Conserved Domains (2) summary
    cd10295
    Location:82 → 181
    GST_C_Sigma; C-terminal, alpha helical domain of Class Sigma Glutathione S-transferases
    cd03039
    Location:4 → 73
    GST_N_Sigma_like; GST_N family, Class Sigma_like; composed of GSTs belonging to class Sigma and similar proteins, including GSTs from class Mu, Pi and Alpha. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of ...
Nucleotide Protein
Heading Accession and Version

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