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LOC103864452 cytochrome P450 708A2-like [ Brassica rapa (field mustard) ]

Gene ID: 103864452, updated on 7-Dec-2023

Summary

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Gene symbol
LOC103864452
Gene description
cytochrome P450 708A2-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Brassica rapa
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Genomic context

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See LOC103864452 in Genome Data Viewer
Location:
chromosome: A4
Exon count:
8
Annotation release Status Assembly Chr Location
103.20201202 current CAAS_Brap_v3.01 (GCF_000309985.2) A04 NC_024798.2 (12975154..12978089)
101 previous assembly Brapa_1.0 (GCF_000309985.1) A4 NC_024798.1 (10244124..10246731)

Chromosome A04 - NC_024798.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC103864448 Neighboring gene tirucalladienol synthase-like Neighboring gene cytochrome P450 708A2-like Neighboring gene casein kinase II subunit alpha-4, chloroplastic

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables heme binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables monooxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in sterol metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cytochrome P450 708A2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Brassica rapa Updated Annotation Release 103.20201202

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CAAS_Brap_v3.01 Primary Assembly

Genomic

  1. NC_024798.2 Reference CAAS_Brap_v3.01 Primary Assembly

    Range
    12975154..12978089
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009142200.2 → XP_009140448.1  cytochrome P450 708A2-like

    UniProtKB/TrEMBL
    A0A397ZKQ0, A0A3P6CK60
    Conserved Domains (1) summary
    cl12078
    Location:9 → 477
    p450; Cytochrome P450
Nucleotide Protein
Heading Accession and Version

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