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LOC103861839 F-box protein GID2 [ Brassica rapa (field mustard) ]

Gene ID: 103861839, updated on 7-Dec-2023

Summary

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Gene symbol
LOC103861839
Gene description
F-box protein GID2
Gene type
protein coding
RefSeq status
MODEL
Organism
Brassica rapa
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Genomic context

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See LOC103861839 in Genome Data Viewer
Location:
chromosome: A1
Exon count:
1
Annotation release Status Assembly Chr Location
103.20201202 current CAAS_Brap_v3.01 (GCF_000309985.2) A01 NC_024795.2 (7961053..7961913)
101 previous assembly Brapa_1.0 (GCF_000309985.1) A1 NC_024795.1 (7720707..7721529)

Chromosome A01 - NC_024795.2Genomic Context describing neighboring genes Neighboring gene endoplasmin homolog Neighboring gene E3 ubiquitin-protein ligase APD1 Neighboring gene 3-oxo-Delta(4,5)-steroid 5-beta-reductase Neighboring gene acyl-CoA-binding domain-containing protein 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of gibberellic acid mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of SCF ubiquitin ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
F-box protein GID2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Brassica rapa Updated Annotation Release 103.20201202

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CAAS_Brap_v3.01 Primary Assembly

Genomic

  1. NC_024795.2 Reference CAAS_Brap_v3.01 Primary Assembly

    Range
    7961053..7961913
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009139548.3 → XP_009137796.1  F-box protein GID2

    See identical proteins and their annotated locations for XP_009137796.1

    UniProtKB/TrEMBL
    A0A398ALM0, A0A3P5ZQB8, M4DBB6
    Conserved Domains (1) summary
    pfam00646
    Location:31 → 73
    F-box; F-box domain
Nucleotide Protein
Heading Accession and Version

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