U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC103853878 cytochrome P450 79B1 [ Brassica rapa (field mustard) ]

Gene ID: 103853878, updated on 7-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
LOC103853878
Gene description
cytochrome P450 79B1
Gene type
protein coding
RefSeq status
MODEL
Organism
Brassica rapa
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
Also known as
CYP79B1; CYP79B2-1
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC103853878 in Genome Data Viewer
Location:
chromosome: A1
Exon count:
2
Annotation release Status Assembly Chr Location
103.20201202 current CAAS_Brap_v3.01 (GCF_000309985.2) A01 NC_024795.2 (407985..410390)
101 previous assembly Brapa_1.0 (GCF_000309985.1) A1 NC_024795.1 (373984..376138)

Chromosome A01 - NC_024795.2Genomic Context describing neighboring genes Neighboring gene ubiquitin carboxyl-terminal hydrolase 3 Neighboring gene adenylyl-sulfate kinase 2, chloroplastic Neighboring gene pentatricopeptide repeat-containing protein At4g39952, mitochondrial Neighboring gene chaperone protein dnaJ A6, chloroplastic

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Activation of defense responses in Chinese cabbage by a nonhost pathogen, Pseudomonas syringae pv. tomato. Park YS, et al. J Biochem Mol Biol, 2005 Nov 30. PMID 16336791
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables heme binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables monooxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
cytochrome P450 79B1
Names
AL35708-BR-1
cytochrome P450 79b2
cytochrome P450-like protein

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Brassica rapa Updated Annotation Release 103.20201202

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CAAS_Brap_v3.01 Primary Assembly

Genomic

  1. NC_024795.2 Reference CAAS_Brap_v3.01 Primary Assembly

    Range
    407985..410390
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009130809.3 → XP_009129057.2  cytochrome P450 79B1

    UniProtKB/TrEMBL
    A0A398AH58, C5H9N4
    Conserved Domains (1) summary
    cl12078
    Location:1 → 540
    p450; Cytochrome P450
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases