U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC103831213 conserved oligomeric Golgi complex subunit 5 [ Brassica rapa (field mustard) ]

Gene ID: 103831213, updated on 7-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
LOC103831213
Gene description
conserved oligomeric Golgi complex subunit 5
Gene type
protein coding
RefSeq status
MODEL
Organism
Brassica rapa
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC103831213 in Genome Data Viewer
Location:
chromosome: A7
Exon count:
5
Annotation release Status Assembly Chr Location
103.20201202 current CAAS_Brap_v3.01 (GCF_000309985.2) A07 NC_024801.2 (23780489..23786875, complement)
101 previous assembly Brapa_1.0 (GCF_000309985.1) A7 NC_024801.1 (17730425..17734045, complement)

Chromosome A07 - NC_024801.2Genomic Context describing neighboring genes Neighboring gene alpha-L-fucosidase 3 Neighboring gene uncharacterized LOC117126651 Neighboring gene histidine-rich glycoprotein Neighboring gene uncharacterized LOC103831212 Neighboring gene protein POLLEN DEFECTIVE IN GUIDANCE 1 Neighboring gene binding partner of ACD11 1 Neighboring gene ABC transporter I family member 17

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in intra-Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Golgi transport complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
conserved oligomeric Golgi complex subunit 5

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Brassica rapa Updated Annotation Release 103.20201202

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CAAS_Brap_v3.01 Primary Assembly

Genomic

  1. NC_024801.2 Reference CAAS_Brap_v3.01 Primary Assembly

    Range
    23780489..23786875 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009107093.3 → XP_009105341.1  conserved oligomeric Golgi complex subunit 5

    UniProtKB/TrEMBL
    A0A397YU21, A0A8D9MA60, M4CJ85
    Conserved Domains (1) summary
    cl22951
    Location:74 → 172
    Vps51; Vps51/Vps67

RNA

  1. XR_004449349.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases