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POPDC2 popeye domain cAMP effector 2 [ Serinus canaria (Common canary) ]

Gene ID: 103827113, updated on 20-Sep-2024

Summary

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Gene symbol
POPDC2
Gene description
popeye domain cAMP effector 2
See related
EnsemblRapid:ENSSCAG00000009705
Gene type
protein coding
RefSeq status
MODEL
Organism
Serinus canaria
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Fringillidae; Carduelinae; Serinus
Orthologs
human mouse all
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Genomic context

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See POPDC2 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_02 current serCan2020 (GCF_022539315.1) 1 NC_066313.1 (24555025..24567148, complement)

Chromosome 1 - NC_066313.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC103827110 Neighboring gene phospholipase A1 member A Neighboring gene cytochrome c oxidase copper chaperone Neighboring gene uncharacterized LOC127060119

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_066313.1 Chromosome 1 Reference serCan2020 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cAMP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in sarcolemma IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
popeye domain-containing protein 2
Names
popeye domain containing 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_022539315.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference serCan2020 Primary Assembly

Genomic

  1. NC_066313.1 Reference serCan2020 Primary Assembly

    Range
    24555025..24567148 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009102586.4 → XP_009100834.2  popeye domain-containing protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A8C9N5S1
    Conserved Domains (1) summary
    pfam04831
    Location:43 → 269
    Popeye; Popeye protein conserved region

  2. XM_009102585.4 → XP_009100833.1  popeye domain-containing protein 2 isoform X2

    Related
    ENSSCAP00000013034.2, ENSSCAT00000014666.2
    Conserved Domains (1) summary
    pfam04831
    Location:43 → 269
    Popeye; Popeye protein conserved region
Nucleotide Protein
Heading Accession and Version

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