U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

RXYLT1 ribitol xylosyltransferase 1 [ Serinus canaria (Common canary) ]

Gene ID: 103820429, updated on 12-Aug-2024

Summary

Go to the top of the page Help
Gene symbol
RXYLT1
Gene description
ribitol xylosyltransferase 1
See related
EnsemblRapid:ENSSCAG00000000783
Gene type
protein coding
RefSeq status
MODEL
Organism
Serinus canaria
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Fringillidae; Carduelinae; Serinus
Also known as
TMEM5
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See RXYLT1 in Genome Data Viewer
Location:
chromosome: 1A
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_02 current serCan2020 (GCF_022539315.1) 1A NC_066314.1 (31908292..31918388)

Chromosome 1A - NC_066314.1Genomic Context describing neighboring genes Neighboring gene protein phosphatase, Mg2+/Mn2+ dependent 1H Neighboring gene arginine vasopressin receptor 1A Neighboring gene SLIT-ROBO Rho GTPase activating protein 1 Neighboring gene KICSTOR subunit 2

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_066314.1 Chromosome 1A Reference serCan2020 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ribitol beta-1,4-xylosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
ribitol-5-phosphate xylosyltransferase 1
Names
transmembrane protein 5

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_022539315.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference serCan2020 Primary Assembly

Genomic

  1. NC_066314.1 Reference serCan2020 Primary Assembly

    Range
    31908292..31918388
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030238556.2 → XP_030094416.2  ribitol-5-phosphate xylosyltransferase 1 isoform X1

    Related
    ENSSCAP00000000944.2, ENSSCAT00000001070.2

  2. XM_050969934.1 → XP_050825891.1  ribitol-5-phosphate xylosyltransferase 1 isoform X2

  3. XM_018919676.3 → XP_018775221.2  ribitol-5-phosphate xylosyltransferase 1 isoform X3

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.