U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

PGM5 phosphoglucomutase 5 [ Serinus canaria (Common canary) ]

Gene ID: 103819466, updated on 12-Aug-2024

Summary

Go to the top of the page Help
Gene symbol
PGM5
Gene description
phosphoglucomutase 5
See related
EnsemblRapid:ENSSCAG00000004248
Gene type
protein coding
RefSeq status
MODEL
Organism
Serinus canaria
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Fringillidae; Carduelinae; Serinus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See PGM5 in Genome Data Viewer
Location:
chromosome: Z
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_02 current serCan2020 (GCF_022539315.1) Z NC_066343.1 (50055226..50123830)

Chromosome Z - NC_066343.1Genomic Context describing neighboring genes Neighboring gene dedicator of cytokinesis 8 Neighboring gene Zn regulated GTPase metalloprotein activator 1A Neighboring gene uncharacterized LOC108962600 Neighboring gene transmembrane protein 252

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_066343.1 Chromosome Z Reference serCan2020 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphoglucomutase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in myofibril assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in striated muscle tissue development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in adherens junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cell-substrate junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sarcolemma IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
phosphoglucomutase-like protein 5

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_022539315.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference serCan2020 Primary Assembly

Genomic

  1. NC_066343.1 Reference serCan2020 Primary Assembly

    Range
    50055226..50123830
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009093975.4 → XP_009092223.2  phosphoglucomutase-like protein 5

    UniProtKB/TrEMBL
    A0A8C9U684
    Related
    ENSSCAP00000005296.2, ENSSCAT00000006084.2
    Conserved Domains (1) summary
    cl38939
    Location:10 → 567
    phosphohexomutase; The alpha-D-phosphohexomutase superfamily includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Members of this family include the phosphoglucomutases (PGM1 and PGM2), phosphoglucosamine ...
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.